# install `remotes` package if you don't have it already
# install.packages("remotes")
remotes::install_github("biostats-r/biostats.tutorials")Enough R to write a thesis
From raw data to finished thesis
The biostats books, apps, and tutorials are written to give you enough skills to write a thesis.
The books emphasis reproducible research.
Biostats books
Working in R
Learn how to import, manipulate and visualise data with our working in R book. After an introduction to R, this book has a tidyverse flavour, showing how to manipulate data with dplyr and make publishable plots with ggplot2. It includes lots of exercises to hone your skills.
The data life-cycle
Your data are precious. Learn how to take care of them with our data life-cycle book.
Statistics in R
Coming soon!
Reproducible documents with R
Learn how to write reproducible documents (anything from a course assignment to a thesis or manuscript) in quarto: no more copy-paste nightmares. Quarto is the successor to R markdown (our earlier R markdown book is here). All the biostats books were written in R markdown or quarto; you can see the source code in our repo on GitHub.
Git and GitHub
Learn how to use version control with our step-by-step guide to setting up and using git and GitHub in RStudio.
Enough targets to Write a Thesis
Learn how to run data analysis pipeline for reproducible and scalable workflows. Our guide to using the targets package will show you how.
Writing an R package
Want to make your code into an R package? Our guide to writing an R package will show you how.
Biostats apps and tutorials
We have developed interactive learnr tutorials for
- naming objects
- dates and times
- string manipulation
and shiny apps to explore some statistical concepts.
These can be installed from biostats apps and learnr tutorials with
The Biostats team
These books are a collaboration between the Department of Biological Sciences, University of Bergen and the Department of Mathematical Sciences, University of Trondheim.
This is BioCeed product.